MRIQC: individual T1w
report
Summary
- Subject ID: 0002.
- Date and time: 2017-08-09, 18:17.
- MRIQC version: 0.9.7.
- Workflow details:
- Detected a zero-filled frame, has the original image been rotated?
- File has no metadata (sidecar JSON file missing or empty)
- Image parameters:
| cjv | 0.3371343076434169 |
| cnr | 3.9204790546598054 |
| efc | 0.6788163318448562 |
| fber | 32.40660858154297 |
| fwhm | avg | 3.62792 |
| fwhm | x | 3.5296746666666667 |
| fwhm | y | 3.7944853333333333 |
| fwhm | z | 3.5596 |
| icvs | csf | 0.25614091939073713 |
| icvs | gm | 0.3935202000885146 |
| icvs | wm | 0.3503388805207483 |
| inu | med | 1.2723915576934814 |
| inu | range | 0.2876843154430391 |
| qi | 1 | 0.0 |
| qi | 2 | 0.0004267519977448314 |
| rpve | csf | 16.223438921588652 |
| rpve | gm | 10.199805248866648 |
| rpve | wm | 14.830953614488363 |
| size | x | 256 |
| size | y | 256 |
| size | z | 162 |
| snr | csf | 3.533737689113768 |
| snr | gm | 8.825324022304324 |
| snr | total | 9.925396730700763 |
| snr | wm | 17.4171284806842 |
| snrd | csf | 10.107444682665516 |
| snrd | gm | 17.29874027986819 |
| snrd | total | 18.317743290227025 |
| snrd | wm | 27.547044908147367 |
| spacing | x | 0.9375 |
| spacing | y | 0.9375 |
| spacing | z | 1.0 |
| summary | bg | k | 0.9380242224994606 |
| summary | bg | mad | 23.78203773498535 |
| summary | bg | mean | 101.52737426757812 |
| summary | bg | median | 99.6755142211914 |
| summary | bg | n | 3340111.0 |
| summary | bg | p05 | 64.68476867675781 |
| summary | bg | p95 | 145.76677703857422 |
| summary | bg | stdv | 25.4061336517334 |
| summary | csf | k | 0.4472913586794771 |
| summary | csf | mad | 92.10713958740234 |
| summary | csf | mean | 355.874755859375 |
| summary | csf | median | 366.9093017578125 |
| summary | csf | n | 24162.0 |
| summary | csf | p05 | 156.47608795166016 |
| summary | csf | p95 | 505.6620697021485 |
| summary | csf | stdv | 103.8282241821289 |
| summary | gm | k | 0.1813463581276764 |
| summary | gm | mad | 69.21609497070312 |
| summary | gm | mean | 629.1373291015625 |
| summary | gm | median | 627.9597778320312 |
| summary | gm | n | 23819.0 |
| summary | gm | p05 | 513.7724853515625 |
| summary | gm | p95 | 748.4023986816406 |
| summary | gm | stdv | 71.1528091430664 |
| summary | wm | k | 0.18817801838687487 |
| summary | wm | mad | 56.205501556396484 |
| summary | wm | mean | 1000.0300903320312 |
| summary | wm | median | 999.982421875 |
| summary | wm | n | 255171.0 |
| summary | wm | p05 | 905.5697631835938 |
| summary | wm | p95 | 1094.3440551757812 |
| summary | wm | stdv | 57.41362380981445 |
| tpm | overlap | csf | 0.1740407943725586 |
| tpm | overlap | gm | 0.4595579206943512 |
| tpm | overlap | wm | 0.567345142364502 |
| wm2max | 0.5649706664623712 |
Visual reports
Provenance information
| md5sum | 5adfad95508a6d9d77117464460f9df1 |
| software | mriqc |
| version | 0.9.7 |
For details on the IQMs (image quality metrics) and further information on
the enclosed plots, please read the
documentation.